STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0740DUF362-containing protein. (316 aa)    
Predicted Functional Partners:
cce_4143
Unknown.
  
     0.586
cce_2823
Conserved hypothetical protein.
  
     0.580
cce_2140
Unknown.
  
     0.520
cce_2245
DUF928-containing protein.
  
     0.490
cce_0536
Unknown.
  
     0.483
cce_4355
Unknown.
  
     0.483
cce_1935
Conserved hypothetical protein.
  
     0.479
cce_0741
Conserved hypothetical protein.
       0.478
cce_2339
Oxidoreductase, aldo/keto reductase family.
 
     0.478
cce_2662
Conserved hypothetical protein.
  
   
 0.456
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.