STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0761Probable extracellular solute-binding protein, family 1. (421 aa)    
Predicted Functional Partners:
cce_0276
ATP-binding protein of sugar ABC transportor; Belongs to the ABC transporter superfamily.
 
 0.973
cce_4082
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.973
cce_0748
Permease protein of sugar ABC transporter.
 
 
 0.959
cce_0942
Probable permease protein of sugar ABC transporter, membrane component.
 
 
 0.949
cce_0762
Hypothetical protein; Contains a mechanosensitive ion channel, MscS domain.
 
     0.698
malQ
4-alpha-glucanotransferase.
  
  
 0.694
cce_0286
Permease protein of sugar ABC transporter.
 
   
 0.552
ribD
Riboflavin biosynthesis protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.551
cce_0910
ATP-binding protein of ABC transporter.
     
  0.540
cce_1246
Putative permease YjgP/YjgQ.
     
  0.540
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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