STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0763Glycosyl transferase, family 2. (337 aa)    
Predicted Functional Partners:
cce_1921
Glycosyl transferase, group 1.
 
    0.838
cce_2102
Hypothetical protein.
 
    0.789
cce_4724
Glycosyl transferase, family 2.
 
     0.770
cce_1920
Putative glycosyl transferase.
 
   
 0.713
cce_0617
Glycosyl transferase, group 1.
  
    0.706
cce_3082
Putative bacterial luciferase-like protein.
  
     0.631
cce_0764
Unknown; Contains TPR_1 tetratricopeptide repeat domains.
       0.565
cce_3739
Putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Belongs to the glycosyltransferase 26 family.
 
  
 0.535
cce_0762
Hypothetical protein; Contains a mechanosensitive ion channel, MscS domain.
       0.481
cce_1468
Putative lipopolysaccharide biosynthesis.
 
  
 0.472
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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