STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0772Unknown; Contains a FAD dependent oxidoreductase domain. (485 aa)    
Predicted Functional Partners:
cce_0771
Hypothetical protein; Contains a ferredoxin domain.
     
 0.773
cce_3565
Conserved hypothetical protein.
  
     0.575
cce_0815
Unknown.
    
 0.559
cce_3385
Hypothetical protein; Contains a Cyclic nucleotide-binding domain.
  
   0.538
cce_0773
Unknown.
       0.533
cce_2672
Conserved hypothetical protein.
  
   
 0.529
cce_3078
Polyketide synthase.
  
 
 0.517
cce_2731
Probable cyclopropane-fatty-acyl-phospholipid synthase; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
  
    0.501
cce_3079
Probable polyketide synthase.
  
 
 0.493
cce_5089
Putative transposase.
  
     0.478
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.