Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0775Unknown; Contains a FAD dependent oxidoreductase domain. (370 aa)    
Predicted Functional Partners:
cce_0774
Hypothetical protein; Contains DUF21 and CBS domains.
       0.773
psbQ
Photosystem II protein Q.
       0.637
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.577
cce_2478
Unknown; Contains a FAD dependent oxidoreductase domain.
  
     0.554
cce_0777
Putative hydrolase.
   
  0.516
thiOG
Bifunctional glycine oxidase/thiamine biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
0.480
cce_3078
Polyketide synthase.
  
 
 0.457
crtR
Beta-carotene hydroxylase.
  
     0.457
cce_2371
Unknown.
  
     0.415
cce_2323
Unknown; Contains a catalase domain.
    
 0.405
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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