STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0789Hypothetical protein; Contains a phosphoesterase cyanobacterial, all2852 domain. (365 aa)    
Predicted Functional Partners:
cce_3016
Alkaline phosphatase.
 
     0.710
trmB
CHP91-containing protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.614
cce_4655
Conserved hypothetical protein.
  
     0.614
cce_1183
Conserved hypothetical protein.
  
     0.573
cce_1081
Unknown; Contains a TPR-like helical domain.
  
 
   0.540
cce_0796
Conserved hypothetical protein.
  
     0.523
cce_0073
Unknown.
  
     0.506
cce_2429
Conserved hypothetical protein.
  
     0.489
cce_0714
Hypothetical protein; Contains a CheW-like domain.
  
     0.473
cce_1610
Unknown.
  
     0.465
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.