STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0796Conserved hypothetical protein. (113 aa)    
Predicted Functional Partners:
cce_4617
Unknown.
  
     0.745
cce_1786
Conserved hypothetical protein.
  
     0.737
cce_1081
Unknown; Contains a TPR-like helical domain.
  
     0.722
cce_3628
Unknown.
  
     0.719
cce_4257
Unknown.
  
     0.685
cce_4136
Hypothetical protein; Contains a glycosyl transferase, family 39 and a TPR-like helical domain.
  
     0.682
cce_2662
Conserved hypothetical protein.
  
     0.671
cce_0264
Unknown.
  
     0.662
cce_1935
Conserved hypothetical protein.
  
     0.645
cce_1669
Unknown.
  
     0.638
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.