Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_0795 | cce_0803 | cce_0795 | cce_0803 | Unknown; Contains a peptidase M48, Ste24p domain. | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.548 |
| cce_0803 | cce_0795 | cce_0803 | cce_0795 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Unknown; Contains a peptidase M48, Ste24p domain. | 0.548 |
| cce_0803 | cce_1338 | cce_0803 | cce_1338 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Putative 23S rRNA methyltransferase/RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.864 |
| cce_0803 | cce_2493 | cce_0803 | cce_2493 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Contains a DNA repair protein RadC fragment. | 0.772 |
| cce_0803 | cce_2495 | cce_0803 | cce_2495 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | DNA repair protein radC; Belongs to the UPF0758 family. | 0.772 |
| cce_0803 | cce_2681 | cce_0803 | cce_2681 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Putative dihydrouridine synthase TIM-barrel protein nifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.619 |
| cce_0803 | cobO | cce_0803 | cce_0802 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | cob(I)alamin adenosyltransferase. | 0.762 |
| cce_0803 | mreC | cce_0803 | cce_1999 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Rod shape-determining protein. | 0.726 |
| cce_0803 | psbP | cce_0803 | cce_0804 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Photosystem II oxygen evolving complex protein PsbP, 23 kD extrinsic protein. | 0.511 |
| cce_0803 | rne | cce_0803 | cce_0277 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Ribonuclease E. | 0.506 |
| cce_0803 | rpl19 | cce_0803 | cce_0801 | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 50s ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.614 |
| cce_1338 | cce_0803 | cce_1338 | cce_0803 | Putative 23S rRNA methyltransferase/RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.864 |
| cce_2493 | cce_0803 | cce_2493 | cce_0803 | Contains a DNA repair protein RadC fragment. | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.772 |
| cce_2493 | mreC | cce_2493 | cce_1999 | Contains a DNA repair protein RadC fragment. | Rod shape-determining protein. | 0.749 |
| cce_2495 | cce_0803 | cce_2495 | cce_0803 | DNA repair protein radC; Belongs to the UPF0758 family. | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.772 |
| cce_2495 | mreC | cce_2495 | cce_1999 | DNA repair protein radC; Belongs to the UPF0758 family. | Rod shape-determining protein. | 0.749 |
| cce_2681 | cce_0803 | cce_2681 | cce_0803 | Putative dihydrouridine synthase TIM-barrel protein nifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.619 |
| cobO | cce_0803 | cce_0802 | cce_0803 | cob(I)alamin adenosyltransferase. | Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.762 |
| cobO | psbP | cce_0802 | cce_0804 | cob(I)alamin adenosyltransferase. | Photosystem II oxygen evolving complex protein PsbP, 23 kD extrinsic protein. | 0.444 |
| cobO | rpl19 | cce_0802 | cce_0801 | cob(I)alamin adenosyltransferase. | 50s ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.594 |
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