Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
psbPPhotosystem II oxygen evolving complex protein PsbP, 23 kD extrinsic protein. (183 aa)    
Predicted Functional Partners:
psbO
Photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII.
  
   
 0.911
psb27
Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
   
 0.893
psb28
Photosystem II 13 kD protein; Belongs to the Psb28 family.
  
   
 0.868
psaF
Photosystem I reaction center subunit III.
  
   
 0.772
cce_0862
Unknown.
  
     0.763
cce_1365
Unknown.
  
     0.762
cce_3900
Conserved hypothetical protein.
  
     0.755
cce_2078
DUF1350-containing protein.
  
     0.751
psb29
Photosystem II 22 kD protein; May be involved in photosynthetic membrane biogenesis.
  
   
 0.748
cce_1543
Putative CAB/ELIP/HLIP superfamily protein.
  
     0.747
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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