STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0812Hypothetical protein. (194 aa)    
Predicted Functional Partners:
cce_0813
NUDIX hydrolase.
       0.798
cce_0333
Conserved hypothetical protein.
  
     0.763
cce_2880
Conserved hypothetical protein.
  
     0.762
cce_2983
Unknown; Contains a TPR-like helical domain.
  
     0.754
cce_0207
Conserved hypothetical protein.
  
     0.753
cce_4377
DUF1092-containing protein.
  
     0.739
cce_2926
Unknown.
  
     0.738
cce_1402
Hypothetical protein; Contains a glycosyl transferase, family 39 domain.
  
     0.737
cce_0889
Conserved hypothetical protein.
  
     0.735
cce_2996
Unknown.
  
     0.724
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.