Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0815Unknown. (253 aa)    
Predicted Functional Partners:
cce_0141
Unknown; Contains a methyltransferase type 11 domain.
    
 0.703
chlM
Magnesium-protoporphyrin O-methyltransferase.
    
 0.703
cce_0379
Putative methyltransferase.
    
 0.703
cce_0616
Unknown; Contains a methyltransferase type 12 domain.
    
 0.703
cce_0986
Unknown; Contains a methyltransferase type 11 domain.
    
 0.703
cce_2094
Hypothetical protein; Contains a Methyltransferase type 11 domain.
    
 0.703
cce_3844
Hypothetical protein; Contains DUF202.
  
     0.684
cce_1257
Unknown.
  
    0.661
cce_0749
Hypothetical protein; Contains a peptidase M48, Ste24p domain.
  
     0.600
cce_3846
Hypothetical protein; Contains DUF202.
  
     0.563
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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