Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_0839Putative Na-K-Cl cotransporter. (738 aa)    
Predicted Functional Partners:
glsF
Ferredoxin-dependent glutamate synthase.
  
  
 0.582
cce_0840
Unknown.
       0.580
cce_0838
Unknown.
       0.563
cce_3877
Hypothetical protein; Contains a mechanosensitive ion channel, MscS domain.
  
     0.529
glsA
Probable glutaminase; Belongs to the glutaminase family.
  
 
 0.508
cce_1172
Unknown; Contains a winged helix repressor DNA-binding and a Pleckstrin/ G-protein domain, interacting region domains.
  
   0.506
cce_3078
Polyketide synthase.
   
 
 0.452
pntB
Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
       0.410
pntA-2
Putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2).
       0.410
cce_0271
Probable alpha amylase.
   
 0.403
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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