STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0851Putative amidohydrolase 2. (84 aa)    
Predicted Functional Partners:
cce_0850
Hypothetical protein; Contains an amidohydrolase 2 domain.
 
     0.922
cce_1729
Putative carboxyphosphonoenolpyruvate phosphonomutase.
  
    0.715
cce_0849
Hypothetical protein.
       0.519
cce_2350
Putative alpha-helical ferredoxin.
  
     0.472
cce_0129
Unknown.
 
    0.445
cce_0635
Hypothetical protein.
  
     0.442
cce_0454
Conserved hypothetical protein.
  
     0.429
cce_3078
Polyketide synthase.
 
  
 0.408
cce_2733
Putative Monooxygenase, FAD-binding.
 
  
 0.404
cce_1901
Putative pathogenesis related protein.
  
     0.402
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.