STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icfA2Beta-carbonic anhydrase, periplasmic. (238 aa)    
Predicted Functional Partners:
ccmM
Carbon dioxide concentrating mechanism protein.
    
 
 0.983
ecaA
Putative carbonic anhydrase.
     
 0.972
icfA1
Beta-carbonic anhydrase, carboxysomal; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
0.934
cce_1689
Probable sulfate transporter.
 
  
 0.886
bicA
Putative bicarbonate transporter.
 
  
 0.803
rbcS
Ribulose bisphosphate carboxylase small subunit.
    
 
 0.769
cce_0872
Putative UCP014873.
       0.705
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.619
yrdA
Ferripyochelin binding protein.
  
 
 
 0.608
ccmN
Carbon dioxide concentrating mechanism protein.
    
 
 0.549
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.