Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0942Probable permease protein of sugar ABC transporter, membrane component. (297 aa)    
Predicted Functional Partners:
cce_0943
Probable permease protein of sugar ABC transporter, membrane component.
 0.999
cce_3153
ABC transporter for sugars, solute-binding protein.
 0.997
cce_0276
ATP-binding protein of sugar ABC transportor; Belongs to the ABC transporter superfamily.
 
 
 0.983
cce_0286
Permease protein of sugar ABC transporter.
 
 0.982
cce_4082
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.980
cce_0761
Probable extracellular solute-binding protein, family 1.
 
 
 0.949
cce_1397
Putative ABC transporter for sugars.
 
 
 0.944
cce_3418
Probable extracellular solute-binding protein, family 1.
 
 
 0.938
cce_0941
Hypothetical protein.
       0.628
cce_3801
Putative iron(III)-transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 0.534
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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