STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0954Unknown. (293 aa)    
Predicted Functional Partners:
cce_0955
Hypothetical protein; Contains a phage Gp37Gp68 domain.
 
  
 0.931
cce_4563
Hypothetical protein; Contains a DNA breaking-rejoining enzyme, catalytic core domain.
  
     0.774
cce_4562
Hypothetical protein; Contains a phage integrase-like, catalytic core domain; Belongs to the 'phage' integrase family.
  
     0.764
cce_3492
Hypothetical protein; Contains a serralysin-like metalloprotease, C-terminal domain.
  
     0.590
cce_5144
Putative AAA ATPase.
  
     0.590
cce_4561
Putative integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.494
cce_0956
Putative DNA-methyltransferase.
       0.476
cce_4773
Unknown; Contains a HNH endonuclease domain.
  
     0.452
cce_2006
Hypothetical protein; Contains a DoxX domain.
  
     0.412
cce_0635
Hypothetical protein.
  
    0.401
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.