STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0976Putative CocE/NonD hydrolase. (541 aa)    
Predicted Functional Partners:
cce_1359
Putative creatininase.
 
     0.696
cce_0975
Unknown.
       0.689
cce_1006
Unknown; Contains a FAD linked oxidase, N-terminal domain.
 
     0.593
cce_1675
Unknown.
 
     0.586
cce_0974
Transcriptional Regulator, TetR family.
 
     0.562
cce_0622
Conserved hypothetical protein.
  
     0.532
cce_0459
Unknown.
 
     0.522
cce_0977
Hypothetical protein.
       0.403
cce_0978
Hypothetical protein.
       0.403
cce_0979
Hypothetical protein.
       0.403
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.