STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1003UDP-glucose-beta-D-glucan glucosyltransferase. (725 aa)    
Predicted Functional Partners:
cce_1002
Hypothetical protein.
       0.768
cce_0874
Conserved hypothetical protein.
 
     0.624
cce_2611
Hypothetical protein; Contains PAS, GGDEF, Response regulator receiver, and GAF domains.
 
  
 0.508
cce_1521
Unknown; Contains PAS, GGDEF, EAL, Response regulator receiver, CheY-like, and PAS fold-3 domains.
  
  
 0.483
cce_4177
Hypothetical protein; Contains a GGDEF domain, Forkhead-associated domain, EAL domain, SMAD/FHA domain, and a PAS fold domain.
  
 
 0.461
cce_4651
Hypothetical protein; Contains an EAL signaling domain.
  
 
 0.461
sufS
Cysteine desulphurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.440
cce_0656
Two-component hybrid sensor and regulator.
  
  
 0.427
cce_0891
Unknown; Contains an outer membrane efflux protein domain.
     
 0.400
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.