STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1019Glycosyl transferase, group 1. (396 aa)    
Predicted Functional Partners:
cce_1752
Putative glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family.
 
    0.964
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
 
  
 0.894
comB
Putative 2-phosphosulfolactate phosphatase; Belongs to the ComB family.
  
    0.624
cce_2061
Mannose-1-phosphate guanyltransferase.
 
 
 0.602
cce_1020
Hypothetical protein.
       0.592
cce_1589
Unknown; Contains a transglutaminase-like domain.
  
     0.576
cce_0256
Conserved hypothetical protein.
  
     0.557
rfbW
Mannosyl transferase.
  
     0.517
cce_3245
Unknown.
    
 
 0.467
cce_1134
Unknown.
  
     0.459
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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