STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1024Cytochrome P-450 like protein; Belongs to the cytochrome P450 family. (418 aa)    
Predicted Functional Partners:
cce_1025
AMP-dependent synthetase and ligase/probable acyl-CoA synthase.
  
 0.890
cce_1466
Probable AMP-dependent synthetase and ligase.
  
 0.879
cce_1023
Contains an Acyl carrier protein-like domain.
 
  0.769
cce_3077
AMP-dependent synthetase and ligase, probable acyl-CoA synthase.
   
 0.721
cce_0695
Cytochrome P450.
  
     0.716
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.714
cce_1028
AMP-dependent synthetase and ligase/probable acyl-CoA synthase.
  
 0.691
cce_1022
Alginate O-acetylation protein / membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.
   
   0.680
cce_1021
Hypothetical protein.
       0.664
cce_3078
Polyketide synthase.
  
 0.617
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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