STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1035Putative Iron permease FTR1. (308 aa)    
Predicted Functional Partners:
cce_3039
Ferrichrome iron receptor.
   
  
 0.616
cce_4101
Probable peroxidase.
  
  
 0.585
cce_1034
Unknown; Contains a Ferritin/ribonucleotide reductase-like domain.
     
 0.583
futB
iron(III) ABC transporter permease protein.
   
  
 0.568
feoA1
Ferrous iron transport protein A.
     
 0.513
cce_1036
Unknown.
       0.498
cce_1037
Unknown.
       0.451
cce_1498
Nitrogen assimilation regulatory protein.
 
    0.437
cce_1038
Hypothetical protein.
       0.428
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.