STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1035Putative Iron permease FTR1. (308 aa)    
Predicted Functional Partners:
cce_4101
Probable peroxidase.
  
  
 0.820
cce_4902
Putative substrate-binding protein of ABC transporter.
   
  
 0.751
cce_3039
Ferrichrome iron receptor.
   
  
 0.660
futB
iron(III) ABC transporter permease protein.
   
  
 0.652
cce_1636
Unknown.
   
    0.620
cce_1034
Unknown; Contains a Ferritin/ribonucleotide reductase-like domain.
     
 0.608
cce_1036
Unknown.
       0.498
feoA1
Ferrous iron transport protein A.
     
 0.470
cce_1037
Unknown.
       0.451
cce_2632
Iron transport protein.
   
  
 0.445
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.