STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1051Hypothetical protein; Contains DUF820. (184 aa)    
Predicted Functional Partners:
cce_1052
Putative isochorismatase hydrolase.
       0.543
cce_1082
Hypothetical protein; Contains DUF820.
  
     0.534
cce_4530
Hypothetical protein; Contains DUF820.
  
     0.507
cce_1053
Conserved hypothetical protein.
       0.476
cce_3450
Unknown; Contains DUF820.
  
     0.463
cce_3247
Hypothetical protein; Contains DUF820.
  
     0.450
cce_2704
Unknown; Contains DUF820.
  
     0.434
cce_0051
Hypothetical protein.
  
     0.428
cce_4661
Hypothetical protein; Contains DUF820.
  
     0.402
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.