Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1076Hypothetical protein; Contains a GUN4-like domain and a Peptidase, trypsin-like serine and cysteine domain. (429 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.889
cce_3078
Polyketide synthase.
  
 0.806
cce_1316
Unknown; Contains an ankyrin domain.
  
 0.796
cce_1460
Hypothetical protein; Contains an ankyrin domain.
  
 0.796
cce_2492
Hypothetical protein; Contains an ankyrin domain.
  
 0.796
cce_2579
Hypothetical protein.
  
 0.796
cce_3079
Probable polyketide synthase.
  
 0.794
cce_3046
Hypothetical protein.
  
 0.792
cce_1056
Hypothetical protein.
    
  0.786
cce_1875
Putative Mov34/MPN/PAD-1.
    
  0.786
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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