STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1093Hypothetical protein; Contains a TROVE domain. (534 aa)    
Predicted Functional Partners:
cce_5120
Unknown.
  
     0.647
cce_3498
Protein-arginine deiminase.
  
     0.640
cce_2439
Hypothetical protein; Contains a TrkA-N domain.
  
     0.635
cce_5196
Hypothetical protein; Contains a TrkA-N domain.
  
     0.615
cce_2304
Hypothetical protein; Contains tetratricopeptide repeat domains.
  
    0.568
aspA
Aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily.
  
     0.546
cce_4311
Hypothetical protein.
  
     0.531
cce_2767
Unknown; Contains a phytoene dehydrogenase-related protein domain.
  
     0.512
cce_1925
Contains a GTP-binding protein, HSR1-related domain.
  
     0.464
cce_0238
Hypothetical protein; Contains a putative thiol-disulphide oxidoreductase DCC domain.
  
     0.441
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.