Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1103Unknown. (196 aa)    
Predicted Functional Partners:
cce_1104
Hypothetical protein.
       0.794
cce_0005
Conserved hypothetical protein.
  
     0.701
cce_1102
Putative helicase.
       0.501
cce_1105
Prolyl endopeptidase.
       0.495
cce_0015
Unknown; Contains a Lambda repressor-like, DNA-binding domain.
  
     0.476
cce_1106
Conserved hypothetical protein.
       0.441
cce_0111
Hypothetical protein; Contains DUF820.
  
     0.416
cce_5168
Hypothetical protein.
  
     0.414
cce_0699
Hypothetical protein.
  
     0.413
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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