STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1172Unknown; Contains a winged helix repressor DNA-binding and a Pleckstrin/ G-protein domain, interacting region domains. (189 aa)    
Predicted Functional Partners:
cce_4708
Putative small GTP-binding protein.
  
 
 0.913
cce_0071
Unknown; Contains a GTP-binding protein, HSR1-related domain.
    
 0.895
cce_0467
Conserved hypothetical protein.
    
 0.895
cce_1666
Contains a GTP-binding protein, HSR1-related domain.
    
 0.895
cce_1173
Unknown.
 
     0.809
cce_0209
Unknown; Contains a Mechanosensitive ion channel, MscS domain.
 
      0.806
cce_3498
Protein-arginine deiminase.
  
     0.743
tmk
Putative thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.636
cce_1288
Putative lipoxygenase.
  
     0.614
cce_1171
Hypothetical protein; Contains a TPR-like helical domain.
       0.594
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.