Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_0793 | tatC | cce_0793 | cce_1205 | Unknown; Contains a cupredoxin domain. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.586 |
| cce_1058 | petA | cce_1058 | cce_2959 | DUF1230-containing protein. | Apocytochrome f component of cytochrome b6-f complex; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.749 |
| cce_1058 | psaD | cce_1058 | cce_1341 | DUF1230-containing protein. | Photosystem I reaction center subunit II. | 0.765 |
| cce_1058 | tatC | cce_1058 | cce_1205 | DUF1230-containing protein. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.450 |
| cce_1206 | tatC | cce_1206 | cce_1205 | Hypothetical protein; Contains PAS, GGDEF, and GAF domains. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.636 |
| cce_2635 | tatC | cce_2635 | cce_1205 | Hypothetical protein; Contains a cupredoxin domain. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.586 |
| petA | cce_1058 | cce_2959 | cce_1058 | Apocytochrome f component of cytochrome b6-f complex; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | DUF1230-containing protein. | 0.749 |
| petA | petB | cce_2959 | cce_1383 | Apocytochrome f component of cytochrome b6-f complex; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.997 |
| petA | psaD | cce_2959 | cce_1341 | Apocytochrome f component of cytochrome b6-f complex; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Photosystem I reaction center subunit II. | 0.683 |
| petA | tatC | cce_2959 | cce_1205 | Apocytochrome f component of cytochrome b6-f complex; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.705 |
| petB | petA | cce_1383 | cce_2959 | Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Apocytochrome f component of cytochrome b6-f complex; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.997 |
| petB | tatC | cce_1383 | cce_1205 | Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.487 |
| psaD | cce_1058 | cce_1341 | cce_1058 | Photosystem I reaction center subunit II. | DUF1230-containing protein. | 0.765 |
| psaD | petA | cce_1341 | cce_2959 | Photosystem I reaction center subunit II. | Apocytochrome f component of cytochrome b6-f complex; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.683 |
| psaD | tatC | cce_1341 | cce_1205 | Photosystem I reaction center subunit II. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.481 |
| slt | tatA | cce_1879 | cce_0861 | Probable soluble lytic transglycosylase. | Putative twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.444 |
| slt | tatA-2 | cce_1879 | cce_3568 | Probable soluble lytic transglycosylase. | Putative twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.444 |
| slt | tatC | cce_1879 | cce_1205 | Probable soluble lytic transglycosylase. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.444 |
| tatA | slt | cce_0861 | cce_1879 | Putative twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Probable soluble lytic transglycosylase. | 0.444 |
| tatA | tatA-2 | cce_0861 | cce_3568 | Putative twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Putative twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.905 |
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