STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1206Hypothetical protein; Contains PAS, GGDEF, and GAF domains. (666 aa)    
Predicted Functional Partners:
cce_1185
Two-component hybrid sensor and regulator.
 
 0.995
cce_1777
Probable two-component hybrid sensor and regulator.
 
 0.990
cce_4709
Unknown; Contains a GGDEF domain, EAL domain, and PAS fold-3 domain.
 
0.962
cce_1521
Unknown; Contains PAS, GGDEF, EAL, Response regulator receiver, CheY-like, and PAS fold-3 domains.
 
 
0.945
cce_1186
Two-component hybrid sensor and regulator.
 
 
 0.944
cce_4651
Hypothetical protein; Contains an EAL signaling domain.
 
 0.943
cce_0656
Two-component hybrid sensor and regulator.
 
 0.904
cce_1555
Unknown; Contains a GAF domain.
 
 
 0.901
cce_2032
Hypothetical protein; Contains PAS fold-3, GAF, ELA, and GGDEF domains.
 
 
0.897
cce_1877
Hypothetical protein; Contains a PAS domain, GGDEF domain, EAL domain, Response regulator receiver domain, CheY-like domain, and a PAS fold domain.
 
 
0.895
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.