Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nrtPHigh-affinity nitrate/nitrite bispecific transporter. (529 aa)    
Predicted Functional Partners:
nirA
Ferredoxin-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.989
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.986
hemD
Bifunctional uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase; Belongs to the precorrin methyltransferase family.
  
  
 0.680
glsF
Ferredoxin-dependent glutamate synthase.
      
 0.551
cce_1857
NifU-like protein.
  
  
 0.543
cce_3584
Putative membrane protein; Belongs to the BI1 family.
  
     0.541
amt1
Ammonium/methylammonium permease.
   
  
 0.530
cce_3794
Putative globin-like protein; Belongs to the globin family.
     
 0.517
cmpC
Bicarbontate transport system ATP-binding protein.
     
 0.511
cce_4809
Unknown.
  
     0.507
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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