Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1237Serine/threonine protein kinase. (491 aa)    
Predicted Functional Partners:
cce_2435
Unknown; Contains DUF323.
 
      0.876
cce_0439
Unknown; Contains DUF323 and a CopG-like DNA-binding domain.
 
      0.824
cce_2196
WD-repeat protein.
 
     0.793
cce_0316
Probable serin-threonin phosphatase.
  
     0.773
cce_0149
Probable protein phosphatase.
  
     0.771
cce_2930
Unknown; Contains a phosphatase 2C-like domain.
  
     0.768
cce_3181
Serine/threonine protein kinase.
  
     0.743
cce_1238
Conserved hypothetical protein.
       0.561
cce_1475
WD-repeat protein.
 
     0.512
cce_1150
WD-repeat protein.
 
     0.489
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.