STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1251Unknown. (267 aa)    
Predicted Functional Partners:
cce_1248
Hypothetical protein; Contains a Ion transport 2, bacterial domain.
 
     0.809
cce_1250
Putative RNA-binding protein.
       0.762
cce_0191
Hypothetical protein.
 
     0.750
cce_1252
Unknown; Contains DUF1214 and DUF1254.
 
     0.701
aslB
Putative arylsulfatase regulatory protein.
  
     0.595
cce_1249
Unknown; Contains DUF1400.
 
     0.573
cce_1253
Sulfatase.
 
     0.570
cce_2545
Hypothetical protein; Contains a Ion transport 2, bacterial domain.
  
     0.538
cce_2720
Hypothetical protein.
  
     0.520
cce_3867
Truncated putative carbohydrate-selective OprB family porin; Truncated due to frameshift; Belongs to the OprB family.
  
     0.416
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.