Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1252Unknown; Contains DUF1214 and DUF1254. (443 aa)    
Predicted Functional Partners:
cce_1253
Sulfatase.
 
     0.798
cce_1251
Unknown.
 
     0.700
cce_1568
Putative nonspecific acid phosphatase.
 
     0.687
cce_3858
Sulfatase.
 
     0.679
cce_3848
Sulfatase.
 
     0.674
cce_3870
Sulfatase.
 
     0.640
cce_4223
Hypothetical protein; Contains a neurotransmitter-gated ion-channel domain.
 
      0.625
cce_1250
Putative RNA-binding protein.
       0.595
cce_1248
Hypothetical protein; Contains a Ion transport 2, bacterial domain.
 
     0.478
cce_1254
Hypothetical protein.
       0.469
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.