STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1257Unknown. (760 aa)    
Predicted Functional Partners:
cce_0525
Unknown; Contains a glycosyl transferase, family 2 domain.
  
   0.770
cce_0524
Unknown; Contains a glycosyl transferase, group 1 domain.
  
 
   0.756
cce_3846
Hypothetical protein; Contains DUF202.
  
     0.719
cce_3844
Hypothetical protein; Contains DUF202.
  
     0.711
cce_4466
Hypothetical protein.
  
     0.663
cce_0815
Unknown.
  
    0.660
cce_3834
Unknown.
  
     0.652
cce_0005
Conserved hypothetical protein.
  
     0.640
cce_4998
Contains a PilT protein, N-terminal domain.
  
     0.609
cce_0335
Putative Prokaryotic chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.558
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.