Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_1332 | nagB | cce_1332 | cce_1331 | Hypothetical protein. | glucosamine-6-P isomerase. | 0.675 |
| cce_4637 | glmM | cce_4637 | cce_0707 | N-acetyl-glucosamine-6-phosphate deacetylase. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.913 |
| cce_4637 | glmS | cce_4637 | cce_1266 | N-acetyl-glucosamine-6-phosphate deacetylase. | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.935 |
| cce_4637 | nagB | cce_4637 | cce_1331 | N-acetyl-glucosamine-6-phosphate deacetylase. | glucosamine-6-P isomerase. | 0.998 |
| cscK | glmS | cce_4168 | cce_1266 | Fructokinase. | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.912 |
| cscK | manA1 | cce_4168 | cce_2771 | Fructokinase. | Mannose-6-phosphate isomerase. | 0.901 |
| cscK | manA2 | cce_4168 | cce_4404 | Fructokinase. | Mannose-6-phosphate isomerase. | 0.901 |
| cscK | nagB | cce_4168 | cce_1331 | Fructokinase. | glucosamine-6-P isomerase. | 0.927 |
| cscK | pgi1 | cce_4168 | cce_0666 | Fructokinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.913 |
| cscK | pgi2 | cce_4168 | cce_5178 | Fructokinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.913 |
| glmM | cce_4637 | cce_0707 | cce_4637 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | N-acetyl-glucosamine-6-phosphate deacetylase. | 0.913 |
| glmM | glmS | cce_0707 | cce_1266 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.961 |
| glmM | nagB | cce_0707 | cce_1331 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | glucosamine-6-P isomerase. | 0.911 |
| glmS | cce_4637 | cce_1266 | cce_4637 | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | N-acetyl-glucosamine-6-phosphate deacetylase. | 0.935 |
| glmS | cscK | cce_1266 | cce_4168 | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Fructokinase. | 0.912 |
| glmS | glmM | cce_1266 | cce_0707 | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.961 |
| glmS | manA1 | cce_1266 | cce_2771 | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Mannose-6-phosphate isomerase. | 0.923 |
| glmS | manA2 | cce_1266 | cce_4404 | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Mannose-6-phosphate isomerase. | 0.923 |
| glmS | nagB | cce_1266 | cce_1331 | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | glucosamine-6-P isomerase. | 0.925 |
| glmS | pgi1 | cce_1266 | cce_0666 | Glucosamine-fructose-6-phosphate aminotransferase, isomerising; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.925 |
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