Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_0746 | cce_1363 | cce_0746 | cce_1363 | DUF37-containing protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | 0.696 |
| cce_0746 | cce_1364 | cce_0746 | cce_1364 | DUF37-containing protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Putative 60 kD inner membrane insertion protein. | 0.843 |
| cce_0746 | rnpA | cce_0746 | cce_1366 | DUF37-containing protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Protein subunit of ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.913 |
| cce_0746 | rpl34 | cce_0746 | cce_1367 | DUF37-containing protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.510 |
| cce_0746 | rpl4 | cce_0746 | cce_4015 | DUF37-containing protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.647 |
| cce_1363 | cce_0746 | cce_1363 | cce_0746 | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | DUF37-containing protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.696 |
| cce_1363 | cce_1364 | cce_1363 | cce_1364 | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | Putative 60 kD inner membrane insertion protein. | 0.917 |
| cce_1363 | rnpA | cce_1363 | cce_1366 | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | Protein subunit of ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.819 |
| cce_1363 | rpl34 | cce_1363 | cce_1367 | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.531 |
| cce_1363 | rpl4 | cce_1363 | cce_4015 | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.415 |
| cce_1363 | rps20 | cce_1363 | cce_3490 | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.417 |
| cce_1364 | cce_0746 | cce_1364 | cce_0746 | Putative 60 kD inner membrane insertion protein. | DUF37-containing protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.843 |
| cce_1364 | cce_1363 | cce_1364 | cce_1363 | Putative 60 kD inner membrane insertion protein. | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | 0.917 |
| cce_1364 | rnpA | cce_1364 | cce_1366 | Putative 60 kD inner membrane insertion protein. | Protein subunit of ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.949 |
| cce_1364 | rpl21 | cce_1364 | cce_1391 | Putative 60 kD inner membrane insertion protein. | 50s ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.557 |
| cce_1364 | rpl3 | cce_1364 | cce_4013 | Putative 60 kD inner membrane insertion protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.649 |
| cce_1364 | rpl34 | cce_1364 | cce_1367 | Putative 60 kD inner membrane insertion protein. | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.775 |
| cce_1364 | rpl4 | cce_1364 | cce_4015 | Putative 60 kD inner membrane insertion protein. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.790 |
| cce_1364 | rps10 | cce_1364 | cce_4087 | Putative 60 kD inner membrane insertion protein. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.674 |
| cce_1364 | rps12 | cce_1364 | cce_4091 | Putative 60 kD inner membrane insertion protein. | 30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.567 |
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