Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1397Putative ABC transporter for sugars. (470 aa)    
Predicted Functional Partners:
cce_0942
Probable permease protein of sugar ABC transporter, membrane component.
 
 
 0.944
cce_0943
Probable permease protein of sugar ABC transporter, membrane component.
 
 
 0.933
cce_0748
Permease protein of sugar ABC transporter.
 
 
 0.904
cce_0286
Permease protein of sugar ABC transporter.
 
 
 0.869
cce_0276
ATP-binding protein of sugar ABC transportor; Belongs to the ABC transporter superfamily.
 
 
 0.862
cce_4082
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.857
cce_1398
Hypothetical protein; Contains GGDEF, EAL, and Histidine kinase HAMP region domains.
       0.773
cce_2374
Putative ribose ABC transporter.
 
  
 0.659
cce_1396
Hypothetical protein.
       0.558
cscK
Fructokinase.
 
  
 0.416
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.