STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1412Two-component response regulator. (127 aa)    
Predicted Functional Partners:
cce_1848
Probable two-component sensor histidine kinase.
 
  0.981
cce_3520
Two-component sensor histidine kinase.
 
  0.979
cce_1185
Two-component hybrid sensor and regulator.
 
 
 0.949
cce_1777
Probable two-component hybrid sensor and regulator.
 
 
 0.940
cce_1725
Two-component transcriptional regulatory protein.
  
  
 
0.913
cce_0164
Two-component sensor histidine kinase.
 
 0.908
cce_1413
Probable sensory transduction histidine kinase.
 
 
 0.891
cce_0656
Two-component hybrid sensor and regulator.
 
 
 0.840
cce_2508
Two-component hybrid sensor and regulator.
 
 0.838
cce_2546
Probable two-component sensor histidine kinase.
 
   0.829
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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