STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1451Unknown. (557 aa)    
Predicted Functional Partners:
cce_1453
Hypothetical protein.
       0.553
cce_1460
Hypothetical protein; Contains an ankyrin domain.
  
 
 0.501
cce_0734
Contains a quinoprotein amine dehydrogenase, beta chain-like domain.
  
     0.500
cce_2492
Hypothetical protein; Contains an ankyrin domain.
  
 
 0.499
cce_4947
Hypothetical protein.
    
  0.480
cce_1316
Unknown; Contains an ankyrin domain.
    
 0.434
cce_2579
Hypothetical protein.
    
 0.434
cce_3046
Hypothetical protein.
    
 0.434
putA
Bifunctional proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.418
cce_3078
Polyketide synthase.
     
 0.418
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.