STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1457Unknown; Contains an alpha amylase catalytic subdomain. (574 aa)    
Predicted Functional Partners:
cce_1456
Putative alpha-glucosidase.
 
  
 
0.952
cce_1458
Unknown; Contains an alpha amylase catalytic subdomain.
 
  
 
0.942
npl
Glycoside hydrolase family 13, putative neopullulanase.
  
  
 
0.927
malQ
4-alpha-glucanotransferase.
  
 
 0.918
cscK
Fructokinase.
 
  
 0.918
cce_3484
Putative alpha-glucosidase.
  
  
 
0.915
cce_4673
Beta-glucosidase.
   
 
 0.909
malZ
Probable alpha-glucosidase.
  
  
 
0.907
cce_1627
Unknown; Contains a glycoside hydrolase, family 57 domain.
    
 0.902
cce_0271
Probable alpha amylase.
     
  0.900
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.