STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1513Unknown; Contains an S-layer homology (SLH) domain. (255 aa)    
Predicted Functional Partners:
cce_3864
Putative S-layer OprB family carbohydrate-selective porin; Belongs to the OprB family.
  
     0.768
cce_1373
Hypothetical protein; Essential cell division protein.
  
   
 0.762
cce_1773
DUF177-containing protein.
  
    0.747
cupB
Protein involved in constitutive low affinity CO2 uptake.
  
     0.738
cce_3505
Unknown; Contains a TolB, C-terminal domain.
  
 
 
 0.736
cce_1633
Unknown; Contains a TolB, C-terminal domain.
  
 
 
 0.733
cce_2029
Unknown; Contains an OstA-like protein domain.
  
   
 0.724
cce_1579
Unknown; Contains a fimbrial assembly domain.
  
     0.720
cce_3288
Unknown.
  
     0.717
cupA
Protein involved in constitutive low affinity CO2 uptake.
  
     0.716
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.