STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1523Unknown; Contains a glyoxalase/bleomycin resistance protein/dioxygenase domain. (146 aa)    
Predicted Functional Partners:
cce_1524
CHP02652-containing protein.
 
     0.952
ccmN
Carbon dioxide concentrating mechanism protein.
  
    0.777
cyl0006
Hypothetical protein; Contains a Mo-dependent nitrogenase, C-terminal domain.
  
     0.773
cce_1048
Hypothetical protein; Contains a Mo-dependent nitrogenase, C-terminal domain.
  
     0.773
cce_2729
Unknown.
  
     0.773
cce_4610
Hypothetical protein; Contains a Mo-dependent nitrogenase, C-terminal domain.
  
     0.773
cce_4730
Unknown.
  
     0.772
cce_2427
Hypothetical protein; Contains a Mo-dependent nitrogenase, C-terminal domain.
  
     0.770
rpoZ-2
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
   
 0.769
cpcT
DUF1001-containing protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.765
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.