Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1549Hypothetical protein. (237 aa)    
Predicted Functional Partners:
cce_1550
Unknown.
  
   0.883
cce_1548
Unknown.
       0.590
gidB
Glucose inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.521
cce_2154
Putative regulatory protein cII.
   
   0.413
cce_2448
Putative chromosome partitioning protein, ParA family.
   
   0.413
cce_3374
Unknown; Contains a Cobyrinic acid a,c-diamide synthase domain.
   
   0.413
cce_4120
Unknown; Contains a cobyrinic acid a,c-diamide synthase domain.
   
   0.413
cce_4883
Unknown; Contains a cobyrinic acid a,c-diamide synthase domain.
   
   0.413
cce_5032
Putative cobyrinic acid a,c-diamide synthase.
   
   0.413
cce_5153
Probable chromosome partitioning protein, ParA family.
   
   0.413
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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