Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1550Unknown. (448 aa)    
Predicted Functional Partners:
cce_1549
Hypothetical protein.
  
   0.883
cce_4884
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.772
cce_5033
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.755
cce_1548
Unknown.
       0.590
cce_3783
Hypothetical protein; Contains a DNA methylase N-4/N-6 domain.
  
 
 0.500
cce_2679
Hypothetical protein.
  
 
 0.451
cce_1551
Unknown.
   
   0.435
cce_3747
Unknown; Contains a BRCT domain.
  
    0.416
cce_5114
Hypothetical protein.
  
     0.415
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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