Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1566Unknown; Contains DUF323. (328 aa)    
Predicted Functional Partners:
cce_1568
Putative nonspecific acid phosphatase.
 
     0.846
cce_1567
Putative sodium dependent transporter.
 
     0.823
cce_1253
Sulfatase.
 
   0.749
cce_3858
Sulfatase.
 
   0.728
cce_3848
Sulfatase.
 
   0.726
cce_3870
Sulfatase.
 
   0.725
cce_1042
Putative UCP018005.
 
  
 0.460
sqdX
Probable sulfolipid sulfoquinovosyldiacylglycerol biosynthesis protein.
       0.456
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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