Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1675Unknown. (185 aa)    
Predicted Functional Partners:
cce_4613
Unknown.
  
     0.700
cce_3403
Hypothetical protein.
  
     0.693
cce_3800
Hypothetical protein; Contains a purine and other phosphorylases, family 1 domain.
  
     0.654
cce_0714
Hypothetical protein; Contains a CheW-like domain.
  
     0.653
cce_1579
Unknown; Contains a fimbrial assembly domain.
  
     0.617
cce_0976
Putative CocE/NonD hydrolase.
 
   
 0.593
hupE
Hydrogenase accessory protein.
  
     0.579
cce_1813
Conserved hypothetical protein.
 
  
 0.554
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.548
cce_1677
Conserved hypothetical protein.
 
     0.524
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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