Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
cce_1616 | cce_1644 | Hypothetical protein; Contains a glycosyl transferase, family 39 domain. | Conserved hypothetical protein. | 0.767 |
cce_1616 | cce_1703 | Hypothetical protein; Contains a glycosyl transferase, family 39 domain. | Hypothetical protein; Contains a plasmid stabilization system domain. | 0.438 |
cce_1616 | cce_3140 | Hypothetical protein; Contains a glycosyl transferase, family 39 domain. | Unknown. | 0.596 |
cce_1644 | cce_1616 | Conserved hypothetical protein. | Hypothetical protein; Contains a glycosyl transferase, family 39 domain. | 0.767 |
cce_1644 | cce_1703 | Conserved hypothetical protein. | Hypothetical protein; Contains a plasmid stabilization system domain. | 0.428 |
cce_1644 | cce_3140 | Conserved hypothetical protein. | Unknown. | 0.676 |
cce_1644 | cce_4925 | Conserved hypothetical protein. | Hypothetical protein; Contains a Type I restriction enzyme R protein, N terminus domain. | 0.549 |
cce_1702 | cce_1703 | Unknown. | Hypothetical protein; Contains a plasmid stabilization system domain. | 0.773 |
cce_1703 | cce_1616 | Hypothetical protein; Contains a plasmid stabilization system domain. | Hypothetical protein; Contains a glycosyl transferase, family 39 domain. | 0.438 |
cce_1703 | cce_1644 | Hypothetical protein; Contains a plasmid stabilization system domain. | Conserved hypothetical protein. | 0.428 |
cce_1703 | cce_1702 | Hypothetical protein; Contains a plasmid stabilization system domain. | Unknown. | 0.773 |
cce_1703 | cce_1959 | Hypothetical protein; Contains a plasmid stabilization system domain. | Hypothetical protein; Contains a plasmid stabilization system domain. | 0.584 |
cce_1703 | cce_1997 | Hypothetical protein; Contains a plasmid stabilization system domain. | Hypothetical protein. | 0.568 |
cce_1703 | cce_2320 | Hypothetical protein; Contains a plasmid stabilization system domain. | Hypothetical protein; Contains DUF820. | 0.482 |
cce_1703 | cce_2894 | Hypothetical protein; Contains a plasmid stabilization system domain. | Unknown; Contains DUF820. | 0.527 |
cce_1703 | cce_3140 | Hypothetical protein; Contains a plasmid stabilization system domain. | Unknown. | 0.440 |
cce_1703 | cce_4824 | Hypothetical protein; Contains a plasmid stabilization system domain. | Hypothetical protein; Contains a high-affinity nickel-transporter domain; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.423 |
cce_1703 | cce_4925 | Hypothetical protein; Contains a plasmid stabilization system domain. | Hypothetical protein; Contains a Type I restriction enzyme R protein, N terminus domain. | 0.431 |
cce_1959 | cce_1703 | Hypothetical protein; Contains a plasmid stabilization system domain. | Hypothetical protein; Contains a plasmid stabilization system domain. | 0.584 |
cce_1959 | cce_1997 | Hypothetical protein; Contains a plasmid stabilization system domain. | Hypothetical protein. | 0.568 |
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