STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1712Hypothetical protein. (80 aa)    
Predicted Functional Partners:
cce_3609
Hypothetical protein; Contains DUF820.
  
     0.627
cce_1180
Unknown; Contains a cupredoxin domain.
  
     0.595
cce_1711
CHP1784-containing protein.
       0.545
cce_4836
Unknown; Contains DUF820.
  
     0.504
cce_0478
Conserved hypothetical protein.
  
     0.497
cce_4364
Hypothetical protein; Contains UPF0150.
  
     0.476
cce_3566
Hypothetical protein; Contains DUF820.
  
     0.471
cce_3367
Hypothetical protein; Contains DUF433.
  
     0.468
cce_2838
Putative S23 ribosomal protein.
  
     0.452
cce_1831
Hypothetical protein; Contains a CHP1784 domain.
  
     0.437
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.