STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1737Two-component sensor histidine kinase. (476 aa)    
Predicted Functional Partners:
cce_3559
Two-component response regulator.
 
 0.980
cce_0970
Two-component transcription regulator.
 
 0.978
cce_0678
Two-component response regulator.
 
 
   0.949
cce_1185
Two-component hybrid sensor and regulator.
 
 
0.907
kdpD
Potassium-transporting ATPase D chain.
 
  
   0.905
cce_1777
Probable two-component hybrid sensor and regulator.
 
 
0.900
cce_1555
Unknown; Contains a GAF domain.
 
      0.899
cce_0657
Two-component response regulator.
 
 0.889
cce_0289
Two-component response regulator.
 
   0.846
cce_0817
Two component transcriptional regulator.
   0.835
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.