STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1752Putative glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family. (544 aa)    
Predicted Functional Partners:
cce_1019
Glycosyl transferase, group 1.
 
    0.964
glgA2
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
  0.928
glgA1
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
  0.925
cce_1627
Unknown; Contains a glycoside hydrolase, family 57 domain.
 
  
 
0.913
malQ
4-alpha-glucanotransferase.
     
 0.909
cce_0271
Probable alpha amylase.
     
 0.906
npl
Glycoside hydrolase family 13, putative neopullulanase.
     
 0.906
cce_1806
Putative glycoside hydrolase, family 13.
     
 0.906
glgB1
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
     
 0.906
cce_3941
Alpha amylase.
     
 0.906
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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