Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pknASerine/threonine kinase. (538 aa)    
Predicted Functional Partners:
cce_0149
Probable protein phosphatase.
 
 
 0.844
cce_0316
Probable serin-threonin phosphatase.
 
   0.835
cce_2930
Unknown; Contains a phosphatase 2C-like domain.
 
   0.834
cce_2288
Unknown; Contains TPR_1 tetratricopeptide repeat domains.
 
 
    0.720
cce_4199
ATP-binding protein of ABC transporter.
  
 
 0.651
cce_1852
Polysaccharide deacetylase.
 
     0.643
cce_2196
WD-repeat protein.
 
     0.573
cce_1475
WD-repeat protein.
 
     0.532
cce_0481
Unknown; Contains TPR_1 tetratricopeptide repeat domains.
 
    0.492
cce_2435
Unknown; Contains DUF323.
    0.480
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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